Published in Frontiers in Analytical Science, 2025
Recommended citation: Fu R, Sutcliffe DJ, Dinasarapu AR , Hess EJ and Jinnah HA (2025) Comprehensive measurement of purines in biological samples. Front. Anal. Sci. 5:1600781. https://doi.org/10.3389/frans.2025.1600781
Published in Neurobiology of Disease, 2025
DOPA-responsive dystonia
Recommended citation: Roman KM, Dinasarapu AR , Cherian S, Fan X, Donsante Y, Aravind N, Chan C,S, Jinnah HA, Hess EJ. Striatal cell-type–specific molecular signatures reveal potential therapeutic targets in a model of dystonia Neurobiology of Disease,(2025) https://doi.org/10.1016/j.nbd.2025.106981
Published in Cancer Research, 2024
Recommended citation: Koo J, Seong CS, Parker RE, Dwivedi B, Arthur RA, Dinasarapu AR, Johnston HR, Claussen H, Tucker-Burden C, Ramalingam SS, Fu H,Zhou W, Marcus AI, Gilbert-Ross M. (2023) Live-cell invasive phenotyping uncovers the ALK2/BMP6 iron homeostasis pathway as a therapeutic vulnerability in LKB1-mutant lung cancer" https://doi.org/10.1158/0008-5472.can-23-2631
Published in Annals of Neurology, 2024
Focal Dystonia
Recommended citation: Timsina J, Dinasarapu AR , Kilic-Berkmen G, Budde J, Sung YJ, Klein AM, Cruchaga C, Jinnah HA (2024) Blood-Based Proteomics for Adult-Onset Focal Dystonias. Annals of Neurology, (2024) https://doi.org/10.1002/ana.26929
Published in Journal of Clinical Investigation, 2024
Infectious diseases & Inflammation
Recommended citation: Elizaldi SR, Hawes CE, Verma A, Shaan Lakshmanappa Y, Dinasarapu AR, Schlegel BT, Rajasundaram D, Li J, Durbin-Johnson BP, Ma ZM, Pal PB, Beckman D, Ott S, Raeman R, Lifson J, Morrison JH, Iyer SS (2024). Chronic SIV-induced neuroinflammation disrupts CCR7+CD4+ T cell immunosurveillance in the rhesus macaque brain. J Clin Invest. https://pubmed.ncbi.nlm.nih.gov/38470479/
Published in Parkinsonism & Related Disorders, 2024
Cervical Dystonia
Recommended citation: Scorr LM, Kilic-Berkmen G, Sutcliffe DJ, Dinasarapu AR , McKay JL, Bagchi P, Powell MD, Boss JM, Cereb N, Little M, Gragert L, Hanfelt J, McKeon A, Tyor W, Jinnah HA (2024) Exploration of potential immune mechanisms in cervical dystonia. Parkinsonism & Related Disorders (2024) https://doi.org/10.1016/j.parkreldis.2024.106036
Published in Movement Disorders, 2024
Movement Disorder
Recommended citation: Kilic-Berkmen G, Kim H, Chen D, Yeo CI, Dinasarapu AR , Scorr LM, Yeo WH, Peterson DA, Williams H, Ruby A, Mills R, Jinnah HA (2024) An Exploratory, Randomized, Double-Blind Clinical Trial of Dipraglurant for Blepharospasm. Movement Disorders (2024) https://doi.org/10.1002/mds.29734
Published in Cell Reports, 2023
Brain research
Recommended citation: Roman KM, Dinasarapu AR ,VanSchoiack A, Ross PM, Kroeppler D, Jinnah HA,Hess EJ (2023). Spiny projection neurons exhibit transcriptional signatures within subregions of the dorsal striatum. Cell Reports. https://doi.org/10.1016/j.celrep.2023.113435
Published in Journal of Neurogenetics, 2022
Genetics & Genomics
Recommended citation: Dinasarapu AR , Sutcliffe DJ, Seifar F, Visser JE, Jinnah HA (2022). Abnormalities of Neural Stem Cells in Lesch-Nyhan Disease. Journal of Neurogenetics. 2022;36(2-3):81-87. https://doi.org/10.1080/01677063.2022.2129632
Published in Movement Disorders, 2022
Movement Disorder
Recommended citation: Seifar F, Dinasarapu AR , Jinnah HA (2022) Uric Acid in Parkinsons Disease: What Is the Connection Movement Disorders (2022) https://doi.org/10.1002/mds.29209
Published in Retrovirology, 2022
Infectious diseases & Inflammation
Recommended citation: Yin L, Dinasarapu AR , Borkar SA, Chang KF, De Paris K, Kim-Chang JJ, Sleasman JW, Goodenow MM (2022) Anti-inflammatory effects of recreational marijuana in virally suppressed youth with HIV-1 are reversed by use of tobacco products in combination with marijuana" Retrovirology 19, 10 (2022) https://retrovirology.biomedcentral.com/articles/10.1186/s12977-022-00594-4
Published in Journal of Neuroinflammation, 2022
Infectious diseases & Inflammation
Recommended citation: Hawes CE, Elizaldi SR, Beckman D, Diniz GB, Lakshmanappa YS, Ott S, Durbin-Johnson BP, Dinasarapu AR , Gompers AL, Morrison JH, Iyer SS (2022). Neuroinflammatory transcriptional programs induced in rhesus pre-frontal cortex white matter during acute SHIV infection. Journal of Neuroinflammation, 19, 250. https://jneuroinflammation.biomedcentral.com/articles/10.1186/s12974-022-02610-y
Published in FEBS Letters, 2021
Infectious diseases
Recommended citation: Lakshmanappa YS, Roh JW, Rane NN, Dinasarapu AR , Tran DD, Velu VV, Sheth AN, Ofotokun I, Amara RR, Kelley CF, Waetjen EW, Iyer SS (2021) Circulating integrin α4β7+ CD4 T cells are enriched for proliferative transcriptional programs in HIV infection" FEBS Letters. 595(17):2257-2270. https://febs.onlinelibrary.wiley.com/doi/10.1002/1873-3468.14163
Published in Scientific Reports, 2021
Genetics & Genomics
Recommended citation: Sutcliffe DJ*, Dinasarapu AR *, Visser JE, Hoed JD, Seifar F, Joshi P, Ceballos-Picot I, Sardar T, Hess EJ, Sun YV, Wen Z, Zwick ME, Jinnah HA (2021) Induced Pluripotent Stem Cells from Subjects with Lesch-Nyhan Disease" Scientific Reports 11, 8523 (2021) https://www.nature.com/articles/s41598-021-87955-9
Published in medRxiv, 2021
Functional Genomics
Recommended citation: Chakravorty S, Berger L, Rufibach L, Gloster L, Emmons A, Shenoy S, Hegde M, Dinasarapu AR, Gibson G (2021) Combinatorial clinically driven blood biomarker functional genomics significantly enhances genotype-phenotype resolution and diagnostics in neuromuscular disease." medRxiv https://doi.org/10.1101/2021.01.14.21249850
Published in Molecular Genetics and Metabolism, 2021
Neuroscience
Recommended citation: Briscione MA, Dinasarapu AR, Bagchi P, Donsante Y, Downs AM, Fan X, Hoehner J, Jinnah HA, Hess EJ (2021). "Differential expression of striatal proteins in a mouse model of DOPA-responsive dystonia reveals shared mechanisms among dystonic disorders." Molecular Genetics and Metabolism. 133(4):352-361. https://doi.org/10.1016/j.ymgme.2021.05.010
Published in medRxiv, 2020
Autoimmunity
Recommended citation: Kilic-Berkmen G, Scorr L, Dinasarapu AR, McKay L, Rosen A, Bagchi P, Hanfelt J, McKeon A, Jinnah HA (2020) Autoimmune and Inflammatory Mechanisms in Cervical Dystonia." medRxiv https://doi.org/10.1101/2020.09.03.20187815
Published in PLOS ONE, 2020
Cancer Genomics
Recommended citation: Nabil F. Saba NF*, Dinasarapu AR*, Magliocca KR, Dwivedi B, Seby S, Qin ZS, Patel M, Griffith CC, Wang X, El-Deiry M, Steuer CE, Kowalski J, Shin DM, Zwick ME, Chen ZG (2020). "Signatures of somatic mutations and gene expression from p16INK4A positive head and neck squamous cell carcinomas (HNSCC)." PLOS ONE 15(9): e0238497. https://doi.org/10.1371/journal.pone.0238497
Published in Journal of Virology, 2020
Vaccines and Antiviral Agents
Recommended citation: Verma A, Schmidt B, Nguyen N, Elizaldi S, Walter K, Beck Z, Trinh H, Dinasarapu AR, ... and Iyer SS. (2020). "Impact of Th1 CD4 TFH skewing on antibody responses to an HIV-1 vaccine in Rhesus Macaques." Journal of Virology, 94 (6) e01737-19. https://jvi.asm.org/content/94/6/e01737-19.abstract
Published in mSphere, 2019
Host-Microbe Biology
Recommended citation: Elizaldi SR, Verma A, Walter KA, Rolston M, Dinasarapu AR, Durbin-Johnson BP, Settles M, Kozlowski PA, Raeman R and Iyer SS. (2019). "Rectal microbiome composition correlates with humoral immunity to HIV-1 in vaccinated rhesus macaques." mSphere, 4:e00824-19. http://adinasarapu.github.io/files/mSphere-2019.pdf
Published in Annals Of Neurology, 2018
Recommended citation: Dinasarapu AR, DJ Sutcliffe, ME Zwick, HA Jinnah. (2018). "Modeling DYT1 Dystonia Using Induced Pluripotent Stem Cells." Annals Of Neurology, 84, S198-S199.
Published in MOVEMENT DISORDERS, 2018
Recommended citation: Sutcliffe D, Dinasarapu A, Zwick M, Jinnah H (2018). "Disease Modeling of Lesch-Nyhan Disease Using Induced Pluripotent Stem Cells." MOVEMENT DISORDERS, 33.
Published in Journal of Bioinformatics & Intelligent Control, 2014
Recommended citation: Dinasarapu AR, Gupta S. (2014). "Biological data integration and dissemination on semantic web-a perspective." Journal of Bioinformatics and Intelligent Control. 3(4),273-277. https://doi.org/10.1166/jbic.2014.1100
Published in Human Molecular Genetics, 2014
Recommended citation: Gupta S, Kim SM, Wang Y, Dinasarapu AR, Subramaniam S. (2014). "Statistical insights into major human muscular diseases." Hum Mol Genet. 23(14):3772-8. http://adinasarapu.github.io/files/ddu090.pdf
Published in Bioinformatics, 2013
Recommended citation: Dinasarapu AR, Gupta S, Ram Maurya M, Fahy E, Min J, Sud M, Gersten MJ, Glass CK, Subramaniam S. (2013). "A combined omics study on activated macrophages--enhanced role of STATs in apoptosis, immunity and lipid metabolism." Bioinformatics. 29(21):2735-43. http://adinasarapu.github.io/files/btt469.pdf
Published in Journal of Lipid Research, 2013
Recommended citation: Maurya MR, Gupta S, Li X, Fahy E, Dinasarapu AR, Sud M, Brown HA, Glass CK, Murphy RC, Russell DW, Dennis EA, Subramaniam S. (2013). "Analysis of inflammatory and lipid metabolic networks across RAW264.7 and thioglycolate-elicited macrophages." J Lipid Res. 54(9):2525-42. http://adinasarapu.github.io/files/jlr2013.pdf
Published in Bioinformatics, 2013
Recommended citation: Yang K, Dinasarapu AR, Reis ES, Deangelis RA, Ricklin D, Subramaniam S, Lambris JD. (2013). "CMAP: Complement Map Database." Bioinformatics. 29(21):2735-43. http://adinasarapu.github.io/files/btt269.pdf
Published in Genes & Cancer, 2013
Recommended citation: Dontula R, Dinasarapu A, Chetty C, Pannuru P, Herbert E, Ozer H, Lakka SS. (2013). "MicroRNA 203 Modulates Glioma Cell Migration via Robo1/ERK/MMP-9 Signaling." Genes Cancer. 4(7-8):285-96. http://adinasarapu.github.io/files/cancer.pdf
Published in UCSD Molecule Pages, 2013
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Published in Chemical Reviews, 2011
Recommended citation: Subramaniam S, Fahy E, Gupta S, Sud M, Byrnes RW, Cotter D, Dinasarapu AR, Maurya MR. (2011). "Bioinformatics and Systems Biology of the Lipidome." Chem Rev. 111(10):6452-90. http://adinasarapu.github.io/files/nihms328241.pdf
Published in Bioinformatics, 2011
Recommended citation: Dinasarapu AR, Saunders B, Ozerlat I, Azam K, Subramaniam S. (2011). "Signaling gateway molecule pages—a data model perspective." Bioinformatics. 27(12):1736-1738. http://adinasarapu.github.io/files/btr190.pdf
Published in Genomics Proteomics Bioinformatics, 2006
Recommended citation: Ashok Reddy D and Mitra C K. (2006). "Comparative analysis of transcription start site using mutual information." Geno. Prot. Bioinf.. 4(3), 183-195. http://adinasarapu.github.io/files/geno2006.pdf
Published in Journal of Integrative Bioinformatics, 2006
Recommended citation: Ashok Reddy D, Prasad B V L S and Mitra C K. (2006). "Functional classification of transcription factor binding sites: Information content as a metric." Journal of Integrative Bioinformatics. 3(1), 0020. http://adinasarapu.github.io/files/integrative2006.pdf
Published in Computational Biology & Chemistry, 2006
Recommended citation: Ashok Reddy D, Prasad B V L S and Mitra C K. (2006). "Comparative analysis of core promoter region: Information content from mono and dinucleotide substitution matrices." Comput Biol Chem. 30, 58-62. http://adinasarapu.github.io/files/comp2006.pdf