Dinasarapu AR , Sutcliffe DJ, Ozel E, Thite A, Grychowski L, Visser JE, Hess EJ, Kolk SM, Jinnah HA, Modeling rare genetic disease with gene-edited induced pluripotent stem cells: relevance of the starting stock line, Stem Cells Translational Medicine, 14, 12, 2025.
Dinasarapu AR , Sutcliffe DJ, Grychowski L, Ozel E, Thite A, Visser JE, Hess EJ, Kolk SM, Jinnah HA, Modeling rare genetic disease with patient-derived induced pluripotent stem cells: reassessment of the minimum numbers of lines needed, Stem Cells Translational Medicine, 14, 8, 2025.
Fu R, Sutcliffe DJ, Dinasarapu AR , Hess EJ and Jinnah HA (2025) Comprehensive measurement of purines in biological samples. Front. Anal. Sci. 5:1600781.
Roman KM, Dinasarapu AR , Cherian S, Fan X, Donsante Y, Aravind N, Chan C,S, Jinnah HA, Hess EJ. Striatal cell-type–specific molecular signatures reveal potential therapeutic targets in a model of dystonia Neurobiology of Disease,(2025)
Koo J, Seong CS, Parker RE, Dwivedi B, Arthur RA, Dinasarapu AR, Johnston HR, Claussen H, Tucker-Burden C, Ramalingam SS, Fu H,Zhou W, Marcus AI, Gilbert-Ross M. (2023) Live-cell invasive phenotyping uncovers the ALK2/BMP6 iron homeostasis pathway as a therapeutic vulnerability in LKB1-mutant lung cancer"
Timsina J, Dinasarapu AR , Kilic-Berkmen G, Budde J, Sung YJ, Klein AM, Cruchaga C, Jinnah HA (2024) Blood-Based Proteomics for Adult-Onset Focal Dystonias. Annals of Neurology, (2024)
Elizaldi SR, Hawes CE, Verma A, Shaan Lakshmanappa Y, Dinasarapu AR, Schlegel BT, Rajasundaram D, Li J, Durbin-Johnson BP, Ma ZM, Pal PB, Beckman D, Ott S, Raeman R, Lifson J, Morrison JH, Iyer SS (2024). Chronic SIV-induced neuroinflammation disrupts CCR7+CD4+ T cell immunosurveillance in the rhesus macaque brain. J Clin Invest.
Scorr LM, Kilic-Berkmen G, Sutcliffe DJ, Dinasarapu AR , McKay JL, Bagchi P, Powell MD, Boss JM, Cereb N, Little M, Gragert L, Hanfelt J, McKeon A, Tyor W, Jinnah HA (2024) Exploration of potential immune mechanisms in cervical dystonia. Parkinsonism & Related Disorders (2024)
Kilic-Berkmen G, Kim H, Chen D, Yeo CI, Dinasarapu AR , Scorr LM, Yeo WH, Peterson DA, Williams H, Ruby A, Mills R, Jinnah HA (2024) An Exploratory, Randomized, Double-Blind Clinical Trial of Dipraglurant for Blepharospasm. Movement Disorders (2024)
Roman KM, Dinasarapu AR ,VanSchoiack A, Ross PM, Kroeppler D, Jinnah HA,Hess EJ (2023). Spiny projection neurons exhibit transcriptional signatures within subregions of the dorsal striatum. Cell Reports.
Dinasarapu AR , Sutcliffe DJ, Seifar F, Visser JE, Jinnah HA (2022). Abnormalities of Neural Stem Cells in Lesch-Nyhan Disease. Journal of Neurogenetics. 2022;36(2-3):81-87.
Seifar F, Dinasarapu AR , Jinnah HA (2022) Uric Acid in Parkinsons Disease: What Is the Connection Movement Disorders (2022)
Yin L, Dinasarapu AR , Borkar SA, Chang KF, De Paris K, Kim-Chang JJ, Sleasman JW, Goodenow MM (2022) Anti-inflammatory effects of recreational marijuana in virally suppressed youth with HIV-1 are reversed by use of tobacco products in combination with marijuana" Retrovirology 19, 10 (2022)
Hawes CE, Elizaldi SR, Beckman D, Diniz GB, Lakshmanappa YS, Ott S, Durbin-Johnson BP, Dinasarapu AR , Gompers AL, Morrison JH, Iyer SS (2022). Neuroinflammatory transcriptional programs induced in rhesus pre-frontal cortex white matter during acute SHIV infection. Journal of Neuroinflammation, 19, 250.
Lakshmanappa YS, Roh JW, Rane NN, Dinasarapu AR , Tran DD, Velu VV, Sheth AN, Ofotokun I, Amara RR, Kelley CF, Waetjen EW, Iyer SS (2021) Circulating integrin α4β7+ CD4 T cells are enriched for proliferative transcriptional programs in HIV infection" FEBS Letters. 595(17):2257-2270.
Sutcliffe DJ*, Dinasarapu AR *, Visser JE, Hoed JD, Seifar F, Joshi P, Ceballos-Picot I, Sardar T, Hess EJ, Sun YV, Wen Z, Zwick ME, Jinnah HA (2021) Induced Pluripotent Stem Cells from Subjects with Lesch-Nyhan Disease" Scientific Reports 11, 8523 (2021)
Chakravorty S, Berger L, Rufibach L, Gloster L, Emmons A, Shenoy S, Hegde M, Dinasarapu AR, Gibson G (2021) Combinatorial clinically driven blood biomarker functional genomics significantly enhances genotype-phenotype resolution and diagnostics in neuromuscular disease." medRxiv
Briscione MA, Dinasarapu AR, Bagchi P, Donsante Y, Downs AM, Fan X, Hoehner J, Jinnah HA, Hess EJ (2021). "Differential expression of striatal proteins in a mouse model of DOPA-responsive dystonia reveals shared mechanisms among dystonic disorders." Molecular Genetics and Metabolism. 133(4):352-361.
Kilic-Berkmen G, Scorr L, Dinasarapu AR, McKay L, Rosen A, Bagchi P, Hanfelt J, McKeon A, Jinnah HA (2020) Autoimmune and Inflammatory Mechanisms in Cervical Dystonia." medRxiv
Nabil F. Saba NF*, Dinasarapu AR*, Magliocca KR, Dwivedi B, Seby S, Qin ZS, Patel M, Griffith CC, Wang X, El-Deiry M, Steuer CE, Kowalski J, Shin DM, Zwick ME, Chen ZG (2020). "Signatures of somatic mutations and gene expression from p16INK4A positive head and neck squamous cell carcinomas (HNSCC)." PLOS ONE 15(9): e0238497.
Verma A, Schmidt B, Nguyen N, Elizaldi S, Walter K, Beck Z, Trinh H, Dinasarapu AR, ... and Iyer SS. (2020). "Impact of Th1 CD4 TFH skewing on antibody responses to an HIV-1 vaccine in Rhesus Macaques." Journal of Virology, 94 (6) e01737-19.
Elizaldi SR, Verma A, Walter KA, Rolston M, Dinasarapu AR, Durbin-Johnson BP, Settles M, Kozlowski PA, Raeman R and Iyer SS. (2019). "Rectal microbiome composition correlates with humoral immunity to HIV-1 in vaccinated rhesus macaques." mSphere, 4:e00824-19.
Dinasarapu AR, DJ Sutcliffe, ME Zwick, HA Jinnah. (2018). "Modeling DYT1 Dystonia Using Induced Pluripotent Stem Cells." Annals Of Neurology, 84, S198-S199.
Sutcliffe D, Dinasarapu A, Zwick M, Jinnah H (2018). "Disease Modeling of Lesch-Nyhan Disease Using Induced Pluripotent Stem Cells." MOVEMENT DISORDERS, 33.
Dinasarapu AR, Gupta S. (2014). "Biological data integration and dissemination on semantic web-a perspective." Journal of Bioinformatics and Intelligent Control. 3(4),273-277.
Gupta S, Kim SM, Wang Y, Dinasarapu AR, Subramaniam S. (2014). "Statistical insights into major human muscular diseases." Hum Mol Genet. 23(14):3772-8.
Dinasarapu AR, Gupta S, Ram Maurya M, Fahy E, Min J, Sud M, Gersten MJ, Glass CK, Subramaniam S. (2013). "A combined omics study on activated macrophages--enhanced role of STATs in apoptosis, immunity and lipid metabolism." Bioinformatics. 29(21):2735-43.
Maurya MR, Gupta S, Li X, Fahy E, Dinasarapu AR, Sud M, Brown HA, Glass CK, Murphy RC, Russell DW, Dennis EA, Subramaniam S. (2013). "Analysis of inflammatory and lipid metabolic networks across RAW264.7 and thioglycolate-elicited macrophages." J Lipid Res. 54(9):2525-42.
Yang K, Dinasarapu AR, Reis ES, Deangelis RA, Ricklin D, Subramaniam S, Lambris JD. (2013). "CMAP: Complement Map Database." Bioinformatics. 29(21):2735-43.
Dontula R, Dinasarapu A, Chetty C, Pannuru P, Herbert E, Ozer H, Lakka SS. (2013). "MicroRNA 203 Modulates Glioma Cell Migration via Robo1/ERK/MMP-9 Signaling." Genes Cancer. 4(7-8):285-96.
Subramaniam S, Fahy E, Gupta S, Sud M, Byrnes RW, Cotter D, Dinasarapu AR, Maurya MR. (2011). "Bioinformatics and Systems Biology of the Lipidome." Chem Rev. 111(10):6452-90.
Dinasarapu AR, Saunders B, Ozerlat I, Azam K, Subramaniam S. (2011). "Signaling gateway molecule pages—a data model perspective." Bioinformatics. 27(12):1736-1738.
Ashok Reddy D and Mitra C K. (2006). "Comparative analysis of transcription start site using mutual information." Geno. Prot. Bioinf.. 4(3), 183-195.
Ashok Reddy D, Prasad B V L S and Mitra C K. (2006). "Functional classification of transcription factor binding sites: Information content as a metric." Journal of Integrative Bioinformatics. 3(1), 0020.
Ashok Reddy D, Prasad B V L S and Mitra C K. (2006). "Comparative analysis of core promoter region: Information content from mono and dinucleotide substitution matrices." Comput Biol Chem. 30, 58-62.
Invited talk at Systems biology and Bioinformatics interest group, Atlanta GA, USA
Selected talk at College of Medicine Celebration of Research, Gainesville FL, USA
Invited talk at 2014 Bioinformatics Seminar Series, Gainesville FL, USA
Invited talk at Department of Biology, Arlington TX, USA